C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GATA binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000125418 Gata1-002 ENSMUSG00000031162 10090 - X:7962440-7978071 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalKidneyLungOvaryENSMUST00000125418
Transcript ID Adrenal Kidney Lung Ovary
ENSMUST00000125418 0.375±0.43 0.078±0.04 0.281±0.00 3.559±0.95

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00029K CIL_00029K_0002 CGP X:7930120-7978071

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0000981 IDA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0001077 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0001701 IMP in utero embryonic development
GO:0002039 IPI p53 binding
GO:0003677 IDA DNA binding
GO:0003682 IDA chromatin binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0007267 IMP cell-cell signaling
GO:0008285 IMP negative regulation of cell proliferation
GO:0008301 IDA DNA binding, bending
GO:0030099 IMP myeloid cell differentiation
GO:0030218 IMP erythrocyte differentiation
GO:0030219 IGI megakaryocyte differentiation
GO:0030220 IMP platelet formation
GO:0030502 IMP negative regulation of bone mineralization
GO:0033690 IMP positive regulation of osteoblast proliferation
GO:0035162 IMP embryonic hemopoiesis
GO:0043066 IMP negative regulation of apoptotic process
GO:0043565 IDA sequence-specific DNA binding
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0048468 IMP cell development
GO:0097028 IDA dendritic cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000376665 GATA1-002 protein_coding Homo_sapiens 0 348
ENST00000376670 GATA1-001 protein_coding Homo_sapiens 0 348

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