C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cullin 4A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000125514 Cul4a-004 ENSMUSG00000031446 10090 + 8:13123525-13147362 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonOvaryPlacentaENSMUST00000125514
Transcript ID Brain Colon Ovary Placenta
ENSMUST00000125514 5.950±0.00 4.685±0.00 19.238±6.20 5.373±1.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005GG CIL_0005GG_0002 CGP 8:13077189-13147940
CIL_0000QK CIL_0000QK_0002 CGP 8:13105621-13175338

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0006511 IMP ubiquitin-dependent protein catabolic process
GO:0008284 IDA positive regulation of cell proliferation
GO:0030097 IMP hemopoiesis
GO:0030853 IDA negative regulation of granulocyte differentiation
GO:0031461 IEA cullin-RING ubiquitin ligase complex
GO:0031625 IEA ubiquitin protein ligase binding
GO:0035019 IMP somatic stem cell maintenance
GO:0043161 IDA proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0045732 ISO positive regulation of protein catabolic process
GO:0051246 IMP regulation of protein metabolic process
GO:1900087 IMP positive regulation of G1/S transition of mitotic cell cycle
GO:2000001 IMP regulation of DNA damage checkpoint
GO:2000819 IMP regulation of nucleotide-excision repair

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000326335 CUL4A-201 protein_coding Homo_sapiens 0 1676
ENST00000375440 CUL4A-002 protein_coding Homo_sapiens 0 1668
ENST00000375441 CUL4A-202 protein_coding Homo_sapiens 0 1676
ENST00000451881 CUL4A-203 protein_coding Homo_sapiens 0 1676
ENST00000617546 CUL4A-001 protein_coding Homo_sapiens 0 1676

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