Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide
ENSMUST00000125651	P4ha2-003	ENSMUSG00000018906	10090	+	11:54100963-54127762	retained_intron

Expression Patterns

Transcript ID	Adipose	Adrenal	Bladder	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Testis
ENSMUST00000125651	3.423±1.63	1.310±0.42	1.363±0.01	1.417±1.10	1.828±0.35	0.882±0.19	2.352±0.32	1.179±0.21	0.196±0.00	3.646±0.42	1.481±0.00	2.082±0.48	0.505±0.11

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0007RF	CIL_0007RF_0002	VISTA	11:53756663-54359415
CIL_00093D	CIL_00093D_0002	VISTA	11:53760072-54361368

Gene Ontology
GO ID	Evidence Type	GO Description
No GO terms available.

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENST00000166534	P4HA2-003	protein_coding	Homo_sapiens	0	1452
ENST00000360568	P4HA2-002	protein_coding	Homo_sapiens	0	1544
ENST00000379086	P4HA2-004	protein_coding	Homo_sapiens	0	1544
ENST00000379100	P4HA2-201	protein_coding	Homo_sapiens	0	1544
ENST00000379104	P4HA2-202	protein_coding	Homo_sapiens	0	1452
ENST00000395164	P4HA2-017	protein_coding	Homo_sapiens	0	580
ENST00000401867	P4HA2-001	protein_coding	Homo_sapiens	0	1452
ENST00000416053	P4HA2-011	protein_coding	Homo_sapiens	0	359
ENST00000417528	P4HA2-010	protein_coding	Homo_sapiens	0	713
ENST00000418055	P4HA2-016	protein_coding	Homo_sapiens	0	387
ENST00000428369	P4HA2-009	protein_coding	Homo_sapiens	0	503
ENST00000431054	P4HA2-014	protein_coding	Homo_sapiens	0	713
ENST00000439698	P4HA2-015	protein_coding	Homo_sapiens	0	643
ENST00000453286	P4HA2-005	protein_coding	Homo_sapiens	0	525
ENST00000478055	P4HA2-006	retained_intron	Homo_sapiens	0	215

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