C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000126070 Tcirg1-002 ENSMUSG00000001750 10090 - 19:3896050-3906991 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleOvaryTestisENSMUST00000126070
Transcript ID Muscle Ovary Testis
ENSMUST00000126070 0.384±0.05 3.892±0.00 0.132±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000220 IEA vacuolar proton-transporting V-type ATPase, V0 domain
GO:0005739 IDA mitochondrion
GO:0005765 IEA lysosomal membrane
GO:0005886 IDA plasma membrane
GO:0015078 IEA hydrogen ion transmembrane transporter activity
GO:0015991 IEA ATP hydrolysis coupled proton transport
GO:0016324 IEA apical plasma membrane
GO:0033179 IEA proton-transporting V-type ATPase, V0 domain

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265686 TCIRG1-001 protein_coding Homo_sapiens 0 2296
ENST00000524598 TCIRG1-011 protein_coding Homo_sapiens 0 793
ENST00000525724 TCIRG1-009 retained_intron Homo_sapiens 0 1635
ENST00000527530 TCIRG1-013 retained_intron Homo_sapiens 0 339
ENST00000529364 TCIRG1-014 protein_coding Homo_sapiens 0 545
ENST00000529657 TCIRG1-002 protein_coding Homo_sapiens 0 577
ENST00000530449 TCIRG1-006 retained_intron Homo_sapiens 0 196
ENST00000532635 TCIRG1-016 protein_coding Homo_sapiens 0 1875
ENST00000533005 TCIRG1-004 retained_intron Homo_sapiens 0 867
ENST00000534673 TCIRG1-010 nonsense_mediated_decay Homo_sapiens 0 425

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