C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SURP and G patch domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000126239 Sugp2-005 ENSMUSG00000036054 10090 + 8:70257202-70264296 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryENSMUST00000126239
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary
ENSMUST00000126239 2.991±0.00 4.520±0.00 11.214±0.83 3.314±0.43 2.321±0.19 1.917±0.52 1.246±0.19 1.729±0.49 2.344±0.08 4.019±1.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006BC CIL_0006BC_0002 CGP 8:70184340-70234466

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000330854 SUGP2-007 nonsense_mediated_decay Homo_sapiens 0 459
ENST00000337018 SUGP2-003 protein_coding Homo_sapiens 0 472
ENST00000452918 SUGP2-009 protein_coding Homo_sapiens 0 472
ENST00000593795 SUGP2-013 nonsense_mediated_decay Homo_sapiens 0 263
ENST00000594773 SUGP2-002 nonsense_mediated_decay Homo_sapiens 0 370
ENST00000597280 SUGP2-012 nonsense_mediated_decay Homo_sapiens 0 350
ENST00000598240 SUGP2-005 nonsense_mediated_decay Homo_sapiens 0 383
ENST00000600239 SUGP2-008 nonsense_mediated_decay Homo_sapiens 0 261
ENST00000600377 SUGP2-004 protein_coding Homo_sapiens 0 477
ENST00000601879 SUGP2-001 protein_coding Homo_sapiens 0 477

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