C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: claspin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000251195 CLSPN-001 ENSG00000092853 9606 - 1:35720218-35769967 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000251195
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000251195 0.151±0.00 0.316±0.00 0.237±0.00 0.083±0.00 0.124±0.00 0.028±0.00 0.108±0.00 0.030±0.00 0.202±0.18 0.516±0.00 1.369±0.31

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000077 IMP DNA damage checkpoint
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005654 TAS nucleoplasm
GO:0006260 TAS DNA replication
GO:0006281 IEA DNA repair
GO:0006915 TAS apoptotic process
GO:0006921 TAS cellular component disassembly involved in execution phase of apoptosis
GO:0010997 IPI anaphase-promoting complex binding
GO:0018105 IDA peptidyl-serine phosphorylation
GO:0031572 IDA G2 DNA damage checkpoint
GO:0032147 IDA activation of protein kinase activity
GO:0033314 IMP mitotic DNA replication checkpoint

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048391 Clspn-001 protein_coding Mus_musculus 0 1975
ENSMUST00000126512 Clspn-006 protein_coding Mus_musculus 0 896
ENSMUST00000128202 Clspn-007 processed_transcript Mus_musculus 0 520
ENSMUST00000146944 Clspn-005 processed_transcript Mus_musculus 0 287
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.0000001 64
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.00002 57
ENSMUST00000019937 Sec63-001 protein_coding Mus_musculus 0.0001 55
ENSMUST00000155410 Sec63-002 retained_intron Mus_musculus 0.00009 55
ENSMUST00000124613 Sec63-004 processed_transcript Mus_musculus 0.00001 55
ENSMUST00000105496 Sec63-005 processed_transcript Mus_musculus 0.00001 55

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