C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 208
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000126705 Tmem208-004 ENSMUSG00000014856 10090 + 8:105326388-105329052 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonLiverOvaryENSMUST00000126705
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Liver Ovary
ENSMUST00000126705 16.512±0.18 16.855±2.43 16.843±4.32 14.123±5.05 17.707±1.88 19.219±0.00 15.374±6.23 22.313±2.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005K1 CIL_0005K1_0002 CGP 8:105312341-105335219
CIL_0005K2 CIL_0005K2_0002 CGP 8:105326354-105347953

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000304800 TMEM208-001 protein_coding Homo_sapiens 0 433
ENST00000561586 TMEM208-006 retained_intron Homo_sapiens 0 545
ENST00000562235 TMEM208-002 nonsense_mediated_decay Homo_sapiens 0 448
ENST00000563168 TMEM208-003 retained_intron Homo_sapiens 0 320
ENST00000563271 TMEM208-009 retained_intron Homo_sapiens 0 243
ENST00000563426 TMEM208-008 processed_transcript Homo_sapiens 1.99993e-41 172
ENST00000563953 TMEM208-007 protein_coding Homo_sapiens 0 379
ENST00000564087 TMEM208-012 nonsense_mediated_decay Homo_sapiens 0 361
ENST00000564649 TMEM208-010 retained_intron Homo_sapiens 0 346
ENST00000565201 TMEM208-011 protein_coding Homo_sapiens 0 411
ENST00000567193 TMEM208-005 retained_intron Homo_sapiens 0 767

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