C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SET domain containing 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000126888 Setd6-005 ENSMUSG00000031671 10090 + 8:95716162-95717237 processed_transcript

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000126888
Transcript ID Adipose Bladder Brain Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000126888 2.220±0.90 2.999±0.45 2.218±0.00 1.548±0.00 1.219±0.00 1.846±0.00 2.516±0.00 6.333±0.00 7.513±0.00 0.903±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008Z0 CIL_0008Z0_0002 VISTA 8:95126508-95728314
CIL_0004IY CIL_0004IY_0002 CGP 8:95676980-95719010
CIL_0004IZ CIL_0004IZ_0002 CGP 8:95715915-95807462

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000219315 SETD6-003 protein_coding Homo_sapiens 0 597
ENST00000310682 SETD6-001 protein_coding Homo_sapiens 0 597
ENST00000394266 SETD6-006 protein_coding Homo_sapiens 0 226
ENST00000418480 SETD6-010 processed_transcript Homo_sapiens 0 597
ENST00000422445 SETD6-004 nonsense_mediated_decay Homo_sapiens 0 597
ENST00000427443 SETD6-002 nonsense_mediated_decay Homo_sapiens 0 597
ENST00000467320 SETD6-011 retained_intron Homo_sapiens 0 337

Loading