C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000127243 Spc25-002 ENSMUSG00000005233 10090 - 2:69193895-69206157 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartLiverMuscleOvaryPlacentaENSMUST00000127243
Transcript ID Breast Heart Liver Muscle Ovary Placenta
ENSMUST00000127243 0.446±0.00 0.119±0.05 0.346±0.00 0.108±0.03 2.393±1.23 0.751±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HC CIL_0008HC_0002 VISTA 2:69119794-69721610
CIL_000639 CIL_000639_0002 CGP 2:69135800-69206194
CIL_00063A CIL_00063A_0002 CGP 2:69193895-69227841

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000282074 SPC25-001 protein_coding Homo_sapiens 0 505
ENST00000479309 SPC25-002 processed_transcript Homo_sapiens 0 366
ENST00000611144 SPC25-001 protein_coding Homo_sapiens 0 505
ENST00000612084 SPC25-002 processed_transcript Homo_sapiens 0 366
ENST00000616584 SPC25-201 protein_coding Homo_sapiens 0 505

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