C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SPC25, NDC80 kinetochore complex component
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000479309 SPC25-002 ENSG00000152253 9606 - 2:168834132-168889293 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainKidneyLungTestisENST00000479309
Transcript ID Adipose Brain Kidney Lung Testis
ENST00000479309 0.171±0.00 0.340±0.00 0.556±0.00 0.181±0.00 1.665±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00063C CIL_00063C_0001 CGP 2:168455862-168865514
CIL_000639 CIL_000639_0001 CGP 2:168786539-168913371
CIL_0008HC CIL_0008HC_0001 VISTA 2:168815051-169417863
CIL_00063A CIL_00063A_0001 CGP 2:168834132-168913371

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000167875 Spc25-201 protein_coding Mus_musculus 0 366
ENSMUST00000005365 Spc25-001 protein_coding Mus_musculus 0 366
ENSMUST00000127243 Spc25-002 protein_coding Mus_musculus 0 366
ENSMUST00000112320 Spc25-003 protein_coding Mus_musculus 0 366
ENSMUST00000149045 Spc25-008 protein_coding Mus_musculus 0 357

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