C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: PDZ and LIM domain 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000127271 Pdlim4-002 ENSMUSG00000020388 10090 - 11:54058951-54068991 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleOvaryTestisENSMUST00000127271
Transcript ID Muscle Ovary Testis
ENSMUST00000127271 0.297±0.06 5.875±0.34 0.066±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RF CIL_0007RF_0002 VISTA 11:53756663-54359415
CIL_00093D CIL_00093D_0002 VISTA 11:53760072-54361368

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000253754 PDLIM4-001 protein_coding Homo_sapiens 0 416
ENST00000379018 PDLIM4-002 protein_coding Homo_sapiens 0 394
ENST00000463615 PDLIM4-007 retained_intron Homo_sapiens 0 435
ENST00000474421 PDLIM4-003 retained_intron Homo_sapiens 1e-37 161

Loading