C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: V-set and immunoglobulin domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000127629 Vsig1-002 ENSMUSG00000031430 10090 + X:140923189-140938233 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000127629
Transcript ID Adipose Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000127629 0.264±0.06 0.012±0.00 0.018±0.00 0.067±0.00 1.231±0.18 0.039±0.01 0.024±0.01 0.134±0.05 0.023±0.00 0.039±0.03 30.312±7.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006JG CIL_0006JG_0002 CGP X:140808307-140939472
CIL_0006JJ CIL_0006JJ_0002 CGP X:140907608-140956728

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000217957 VSIG1-001 protein_coding Homo_sapiens 0 484
ENST00000415430 VSIG1-201 protein_coding Homo_sapiens 0 488
ENST00000458383 VSIG1-003 protein_coding Homo_sapiens 2e-38 163
ENST00000479635 VSIG1-004 retained_intron Homo_sapiens 2e-37 159
ENST00000485533 VSIG1-002 processed_transcript Homo_sapiens 0 307

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