C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: BRCA1 associated protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000127703 Brap-005 ENSMUSG00000029458 10090 + 5:121666526-121687248 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaENSMUST00000127703
Transcript ID Brain Ovary Placenta
ENSMUST00000127703 12.760±0.00 10.027±6.73 23.445±0.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TJ CIL_0008TJ_0002 VISTA 5:121625608-122227679

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000327551 BRAP-002 protein_coding Homo_sapiens 0 1297
ENST00000419234 BRAP-001 protein_coding Homo_sapiens 0 1297
ENST00000547043 BRAP-003 retained_intron Homo_sapiens 0 1147

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