C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DENN/MADD domain containing 5B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000127727 Dennd5b-003 ENSMUSG00000030313 10090 - 6:149068580-149101584 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyLiverLungOvaryENSMUST00000127727
Transcript ID Adrenal Breast Colon Kidney Liver Lung Ovary
ENSMUST00000127727 3.167±1.11 3.242±0.59 2.026±0.59 2.503±0.00 5.986±0.63 2.494±0.00 3.429±0.97

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003DK CIL_0003DK_0003 CGP 6:148921035-149101680

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016020 IBA membrane
GO:0017112 IBA Rab guanyl-nucleotide exchange factor activity
GO:0032851 IBA positive regulation of Rab GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000354285 DENND5B-002 protein_coding Homo_sapiens 0 676
ENST00000389082 DENND5B-001 protein_coding Homo_sapiens 0 359
ENST00000536562 DENND5B-003 protein_coding Homo_sapiens 0 462
ENST00000544698 DENND5B-006 nonsense_mediated_decay Homo_sapiens 0 340
ENST00000545147 DENND5B-007 processed_transcript Homo_sapiens 0 215
ENST00000546299 DENND5B-004 protein_coding Homo_sapiens 0 337

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