C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium channel tetramerisation domain containing 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000127755 Kctd5-002 ENSMUSG00000016946 10090 - 17:24056002-24068287 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000127755
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000127755 26.184±0.00 32.157±0.00 63.987±20.20 22.867±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005ER CIL_0005ER_0002 CGP 17:24047734-24150924

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000301738 KCTD5-001 protein_coding Homo_sapiens 0 497
ENST00000402077 KCTD17-001 protein_coding Homo_sapiens 1e-28 132
ENST00000403888 KCTD17-002 protein_coding Homo_sapiens 1e-28 132
ENST00000421900 KCTD17-007 nonsense_mediated_decay Homo_sapiens 8e-26 121
ENST00000427818 AC110299.5-001 processed_pseudogene Homo_sapiens 0 409
ENST00000456470 KCTD17-003 protein_coding Homo_sapiens 1e-28 132
ENST00000462640 KCTD17-006 retained_intron Homo_sapiens 6e-29 132
ENST00000478231 KCTD17-008 retained_intron Homo_sapiens 5e-29 132
ENST00000483389 KCTD17-005 retained_intron Homo_sapiens 4e-29 132
ENST00000564195 KCTD5-004 protein_coding Homo_sapiens 0 202
ENST00000564246 KCTD5-003 processed_transcript Homo_sapiens 0 300
ENST00000610767 KCTD17-201 protein_coding Homo_sapiens 1e-28 132

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