C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: suppressor of Ty 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000127798 Supt3-002 ENSMUSG00000038954 10090 + 17:44777396-45119286 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonLiverLungMuscleOvaryPlacentaENSMUST00000127798
Transcript ID Adipose Adrenal Breast Colon Liver Lung Muscle Ovary Placenta
ENSMUST00000127798 0.876±0.00 1.826±0.28 0.670±0.01 0.371±0.00 0.565±0.24 0.626±0.02 0.583±0.00 1.280±0.28 0.421±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002LE CIL_0002LE_0002 CGP 17:44188572-44814797
CIL_00082L CIL_00082L_0002 VISTA 17:44317720-44919644
CIL_0007Z9 CIL_0007Z9_0002 VISTA 17:44422114-45023789

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000306867 SUPT3H-201 protein_coding Homo_sapiens 0 520
ENST00000371458 SUPT3H-004 protein_coding Homo_sapiens 0 287
ENST00000371459 SUPT3H-006 protein_coding Homo_sapiens 0 961
ENST00000371460 SUPT3H-005 protein_coding Homo_sapiens 0 822
ENST00000475057 SUPT3H-001 nonsense_mediated_decay Homo_sapiens 0 961

Loading