C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: helicase, lymphoid specific
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000127968 Hells-005 ENSMUSG00000025001 10090 + 19:38943689-38950475 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartKidneyLungMuscleOvaryPlacentaTestisENSMUST00000127968
Transcript ID Breast Heart Kidney Lung Muscle Ovary Placenta Testis
ENSMUST00000127968 0.750±0.00 0.063±0.01 0.128±0.07 0.224±0.00 0.127±0.06 7.476±0.00 8.510±10.63 6.703±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003RX CIL_0003RX_0002 CGP 19:38836579-38971051
CIL_00067G CIL_00067G_0002 CGP 19:38930915-39042693

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000239026 HELLS-201 protein_coding Homo_sapiens 0 1022
ENST00000348459 HELLS-001 protein_coding Homo_sapiens 0 1022
ENST00000371332 HELLS-202 protein_coding Homo_sapiens 0 1022
ENST00000394036 HELLS-203 protein_coding Homo_sapiens 0 1022
ENST00000394045 HELLS-204 protein_coding Homo_sapiens 0 669
ENST00000423902 CHD7-001 protein_coding Homo_sapiens 0.0000001 66
ENST00000466552 HELLS-005 retained_intron Homo_sapiens 0 287
ENST00000525508 CHD7-003 protein_coding Homo_sapiens 0.00000004 66

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