C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heat shock 105kDa/110kDa protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000127977 Hsph1-004 ENSMUSG00000029657 10090 - 5:149632039-149636351 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastLungOvaryENSMUST00000127977
Transcript ID Adrenal Breast Lung Ovary
ENSMUST00000127977 12.085±4.66 6.763±1.83 4.156±0.00 18.653±2.85

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UA CIL_0007UA_0002 VISTA 5:149020224-149622595
CIL_0004GB CIL_0004GB_0002 CGP 5:149528679-149636376
CIL_0000PA CIL_0000PA_0003 CGP 5:149614287-149762599

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0051085 IDA chaperone mediated protein folding requiring cofactor

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000320027 HSPH1-001 protein_coding Homo_sapiens 0 444
ENST00000380405 HSPH1-002 protein_coding Homo_sapiens 0 444
ENST00000445273 HSPH1-201 protein_coding Homo_sapiens 0 259
ENST00000602786 HSPH1-003 nonsense_mediated_decay Homo_sapiens 0 444

Loading