C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | predicted gene 28308 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000128102  |
RP23-103L13.12-001 |
ENSMUSG00000101298 |
10090 | - |
6:52163359-52213339  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007OD | CIL_0007OD_0003 | UCNEbase | 6:51462736-52602127 |
| CIL_0008V2 | CIL_0008V2_0002 | VISTA | 6:51578612-52179694 |
| CIL_0008QL | CIL_0008QL_0002 | VISTA | 6:51878169-52478777 |
| CIL_000911 | CIL_000911_0002 | VISTA | 6:51970433-52571615 |
| CIL_000811 | CIL_000811_0002 | VISTA | 6:52019082-52620287 |
| CIL_00097P | CIL_00097P_0002 | VISTA | 6:52142617-52744529 |
| CIL_0003PE | CIL_0003PE_0002 | CGP | 6:52155590-52164831 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000222718
|
HOXA2-001 | protein_coding | Homo_sapiens | 0 | 370 |
|
ENST00000317201
|
HOXA3-002 | protein_coding | Homo_sapiens | 1e-35 | 156 |
|
ENST00000518451
|
HOXA3-008 | processed_transcript | Homo_sapiens | 0 | 484 |
|
ENST00000521401
|
HOXA3-006 | processed_transcript | Homo_sapiens | 3e-36 | 156 |
|
ENST00000522788
|
HOXA3-005 | protein_coding | Homo_sapiens | 0 | 246 |
|
ENST00000612779
|
HOXA2-002 | retained_intron | Homo_sapiens | 0 | 370 |
