C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (sem
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000128347 Sema5b-006 ENSMUSG00000052133 10090 + 16:35661305-35663314 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLungMuscleOvaryPlacentaTestisENSMUST00000128347
Transcript ID Brain Lung Muscle Ovary Placenta Testis
ENSMUST00000128347 10.128±0.00 0.172±0.00 0.114±0.05 1.601±0.00 5.684±4.72 9.049±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008J4 CIL_0008J4_0002 VISTA 16:35298618-35902946

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000195173 SEMA5B-201 protein_coding Homo_sapiens 0 664
ENST00000357599 SEMA5B-001 protein_coding Homo_sapiens 0 664
ENST00000393583 SEMA5B-003 protein_coding Homo_sapiens 0 383
ENST00000451055 SEMA5B-202 protein_coding Homo_sapiens 0 664
ENST00000451541 SEMA5B-004 protein_coding Homo_sapiens 0 704
ENST00000475244 SEMA5B-002 nonsense_mediated_decay Homo_sapiens 0 473
ENST00000616742 SEMA5B-203 protein_coding Homo_sapiens 0 664

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