C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: proteasome (prosome, macropain) subunit, beta type 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000128870 Psmb6-002 ENSMUSG00000018286 10090 + 11:70527072-70527858 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000128870
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000128870 23.739±0.00 30.951±0.00 32.814±20.45 13.733±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003CM CIL_0003CM_0002 CGP 11:70519196-70527858
CIL_0001RF CIL_0001RF_0002 CGP 11:70525367-70558110

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000270586 PSMB6-001 protein_coding Homo_sapiens 0 387
ENST00000571309 PSMB6-003 nonsense_mediated_decay Homo_sapiens 0 287
ENST00000575643 PSMB6-004 retained_intron Homo_sapiens 0 394

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