C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: Rho guanine nucleotide exchange factor (GEF) 16
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000129189 Arhgef16-005 ENSMUSG00000029032 10090 - 4:154282018-154287085 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleOvaryENSMUST00000129189
Transcript ID Muscle Ovary
ENSMUST00000129189 0.141±0.05 1.534±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099V CIL_00099V_0002 VISTA 4:154093365-154697126
CIL_0007TB CIL_0007TB_0002 VISTA 4:154156294-154757167

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000378371 ARHGEF16-003 protein_coding Homo_sapiens 0 536
ENST00000378373 ARHGEF16-002 protein_coding Homo_sapiens 0 536
ENST00000378378 ARHGEF16-001 protein_coding Homo_sapiens 0 536
ENST00000418137 ARHGEF16-007 protein_coding Homo_sapiens 6.99949e-42 174
ENST00000445297 ARHGEF16-005 protein_coding Homo_sapiens 0 375
ENST00000464620 ARHGEF16-006 retained_intron Homo_sapiens 1.99993e-41 174
ENST00000485984 ARHGEF16-004 retained_intron Homo_sapiens 3.00004e-41 174

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