C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: Rho guanine nucleotide exchange factor (GEF) 16
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000445297 ARHGEF16-005 ENSG00000130762 9606 + 1:3468544-3473521 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENST00000445297
Transcript ID Ovary
ENST00000445297 1.793±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007TB CIL_0007TB_0001 VISTA 1:2974017-3574864
CIL_00099V CIL_00099V_0001 VISTA 1:3045529-3649801

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0032321 IEA positive regulation of Rho GTPase activity
GO:0035023 IEA regulation of Rho protein signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000169623 Arhgef16-201 protein_coding Mus_musculus 0 488
ENSMUST00000030898 Arhgef16-001 protein_coding Mus_musculus 0 488
ENSMUST00000144145 Arhgef16-003 retained_intron Mus_musculus 0 488
ENSMUST00000129189 Arhgef16-005 processed_transcript Mus_musculus 0 375

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