C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tubby like protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000129375 Tulp1-012 ENSMUSG00000037446 10090 - 17:28351854-28358662 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastColonHeartKidneyLiverOvaryPlacentaTestisENSMUST00000129375
Transcript ID Adrenal Bladder Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000129375 0.253±0.16 0.136±0.00 0.222±0.00 0.126±0.00 0.068±0.00 0.115±0.02 0.146±0.05 1.056±0.29 8.765±0.70 0.057±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UQ CIL_0008UQ_0002 VISTA 17:28043766-28646334
CIL_0002F1 CIL_0002F1_0002 CGP 17:28331671-28365182
CIL_0002F0 CIL_0002F0_0002 CGP 17:28351515-28517524

Gene Ontology

GO IDEvidence TypeGO Description
GO:0007602 IMP phototransduction
GO:0008020 IMP G-protein coupled photoreceptor activity
GO:0009584 IMP detection of visible light
GO:0060041 IMP retina development in camera-type eye

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229771 TULP1-003 protein_coding Homo_sapiens 0 518
ENST00000322263 TULP1-004 protein_coding Homo_sapiens 0 518
ENST00000614066 TULP1-201 protein_coding Homo_sapiens 0 518

Loading