C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: suppressor of Ty 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000129416 Supt3-003 ENSMUSG00000038954 10090 + 17:44786631-45119279 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000129416
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000129416 0.822±0.32 8.570±0.00 1.783±1.15 0.904±0.45 0.860±0.25 1.316±0.40 0.702±0.29 0.500±0.00 0.834±0.20 5.363±7.03 3.956±2.53 11.649±11.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002LE CIL_0002LE_0002 CGP 17:44188572-44814797
CIL_00082L CIL_00082L_0002 VISTA 17:44317720-44919644
CIL_0007Z9 CIL_0007Z9_0002 VISTA 17:44422114-45023789

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000306867 SUPT3H-201 protein_coding Homo_sapiens 0 520
ENST00000371458 SUPT3H-004 protein_coding Homo_sapiens 0 287
ENST00000371459 SUPT3H-006 protein_coding Homo_sapiens 0 904
ENST00000371460 SUPT3H-005 protein_coding Homo_sapiens 0 822
ENST00000475057 SUPT3H-001 nonsense_mediated_decay Homo_sapiens 0 904

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