C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: solute carrier family 6 (neurotransmitter transporter, serotonin), member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000129572 Slc6a4-002 ENSMUSG00000020838 10090 + 11:77009274-77013053 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalLiverMuscleOvaryENSMUST00000129572
Transcript ID Adrenal Liver Muscle Ovary
ENSMUST00000129572 10.902±0.00 0.265±0.00 0.137±0.00 2.771±0.85

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005335 IEA serotonin:sodium symporter activity
GO:0005887 IEA integral component of plasma membrane
GO:0008504 ISO monoamine transmembrane transporter activity
GO:0015844 ISO monoamine transport
GO:0055085 IEA transmembrane transport
GO:0071310 IDA cellular response to organic substance

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261707 SLC6A4-201 protein_coding Homo_sapiens 0 486
ENST00000394821 SLC6A4-001 protein_coding Homo_sapiens 0 486
ENST00000401766 SLC6A4-002 protein_coding Homo_sapiens 0 486

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