C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: collagen, type III, alpha 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000129611 Col3a1-002 ENSMUSG00000026043 10090 + 1:45311538-45325018 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalOvaryENSMUST00000129611
Transcript ID Adrenal Ovary
ENSMUST00000129611 6.971±0.29 60.903±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004J6 CIL_0004J6_0002 CGP 1:45311538-45503282

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000304636 COL3A1-001 protein_coding Homo_sapiens 0 671
ENST00000317840 COL3A1-201 protein_coding Homo_sapiens 0 588
ENST00000470167 COL3A1-003 retained_intron Homo_sapiens 0 396

Loading