C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | COP9 (constitutive photomorphogenic) homolog, subunit 3 (Arabidopsis thaliana) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000130027  |
Cops3-005 |
ENSMUSG00000019373 |
10090 | - |
11:59826210-59839838  |
processed_transcript |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0009A0 | CIL_0009A0_0002 | VISTA | 11:59693037-60296757 |
| CIL_00040N | CIL_00040N_0002 | CGP | 11:59791408-59839838 |
| CIL_0000NX | CIL_0000NX_0002 | CGP | 11:59817795-59880968 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000268717
|
COPS3-001 | protein_coding | Homo_sapiens | 0 | 617 |
|
ENST00000417352
|
COPS3-008 | protein_coding | Homo_sapiens | 0 | 617 |
|
ENST00000439936
|
COPS3-002 | protein_coding | Homo_sapiens | 0 | 617 |
|
ENST00000462236
|
COPS3-003 | retained_intron | Homo_sapiens | 0 | 394 |
|
ENST00000477299
|
COPS3-006 | nonsense_mediated_decay | Homo_sapiens | 0 | 821 |
|
ENST00000486810
|
COPS3-004 | retained_intron | Homo_sapiens | 0 | 822 |
|
ENST00000492672
|
COPS3-007 | nonsense_mediated_decay | Homo_sapiens | 0 | 580 |
|
ENST00000495640
|
COPS3-005 | nonsense_mediated_decay | Homo_sapiens | 0 | 532 |
|
ENST00000505334
|
RP11-91J3.1-001 | processed_pseudogene | Homo_sapiens | 0 | 215 |
|
ENST00000539941
|
COPS3-014 | protein_coding | Homo_sapiens | 0 | 617 |
|
ENST00000577210
|
COPS3-019 | nonsense_mediated_decay | Homo_sapiens | 0 | 610 |
|
ENST00000577246
|
COPS3-015 | nonsense_mediated_decay | Homo_sapiens | 0 | 508 |
|
ENST00000578317
|
COPS3-013 | nonsense_mediated_decay | Homo_sapiens | 0 | 1175 |
|
ENST00000583160
|
COPS3-018 | protein_coding | Homo_sapiens | 0 | 217 |
|
ENST00000584216
|
COPS3-016 | nonsense_mediated_decay | Homo_sapiens | 0 | 610 |
