C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: transcription factor EB
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000130208 Tfeb-005 ENSMUSG00000023990 10090 + 17:47763170-47786297 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000963 CIL_000963_0002 VISTA 17:47571879-48173076
CIL_00093V CIL_00093V_0002 VISTA 17:47614773-48215356
CIL_0008XI CIL_0008XI_0002 VISTA 17:47688296-48291797
CIL_0008IB CIL_0008IB_0002 VISTA 17:47708185-48309224
CIL_0007QG CIL_0007QG_0002 VISTA 17:47710565-48311720

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0005667 IDA transcription factor complex
GO:0006959 IEA humoral immune response
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0046983 IEA protein dimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000230323 TFEB-001 protein_coding Homo_sapiens 0 322
ENST00000343317 TFEB-015 protein_coding Homo_sapiens 0 320
ENST00000358871 TFEB-010 protein_coding Homo_sapiens 0 324
ENST00000373033 TFEB-005 protein_coding Homo_sapiens 0 320
ENST00000394283 TFEB-004 protein_coding Homo_sapiens 0 322
ENST00000403298 TFEB-201 protein_coding Homo_sapiens 0 320
ENST00000416140 TFEB-008 protein_coding Homo_sapiens 0 320
ENST00000419396 TFEB-006 protein_coding Homo_sapiens 0 320
ENST00000419574 TFEB-002 protein_coding Homo_sapiens 0 320
ENST00000420312 TFEB-202 protein_coding Homo_sapiens 0 283
ENST00000424495 TFEB-014 protein_coding Homo_sapiens 0 322
ENST00000425401 TFEB-011 protein_coding Homo_sapiens 3e-37 158
ENST00000445214 TFEB-009 protein_coding Homo_sapiens 0 283

Loading