C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription factor EB
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000424495 TFEB-014 ENSG00000112561 9606 - 6:41690894-41733690 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderENST00000424495
Transcript ID Bladder
ENST00000424495 3.093±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008F3 CIL_0008F3_0001 VISTA 6:41112821-41713777
CIL_0007QG CIL_0007QG_0001 VISTA 6:41166717-41767957
CIL_0008IB CIL_0008IB_0001 VISTA 6:41169077-41770286
CIL_0008XI CIL_0008XI_0001 VISTA 6:41187113-41790491
CIL_00093V CIL_00093V_0001 VISTA 6:41255486-41855939
CIL_000963 CIL_000963_0001 VISTA 6:41292979-41894337
CIL_00028Y CIL_00028Y_0002 CGP 6:41636882-41736259

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006959 IEA humoral immune response

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113284 Tfeb-011 protein_coding Mus_musculus 0 333
ENSMUST00000024786 Tfeb-001 protein_coding Mus_musculus 0 326
ENSMUST00000141631 Tfeb-006 protein_coding Mus_musculus 0 324
ENSMUST00000159641 Tfeb-013 protein_coding Mus_musculus 0 322
ENSMUST00000130208 Tfeb-005 protein_coding Mus_musculus 0 322
ENSMUST00000113288 Tfeb-003 protein_coding Mus_musculus 0 322
ENSMUST00000086932 Tfeb-002 protein_coding Mus_musculus 0 322
ENSMUST00000160373 Tfeb-014 protein_coding Mus_musculus 0 320
ENSMUST00000125177 Tfeb-004 protein_coding Mus_musculus 0 285
ENSMUST00000137845 Tfeb-012 protein_coding Mus_musculus 5e-37 158
ENSMUST00000126258 Tfeb-010 protein_coding Mus_musculus 5e-37 158

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