| Transcript ID | Testis |
|---|---|
| ENST00000343317 | 0.719±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | transcription factor EB | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000343317  |
TFEB-015 |
ENSG00000112561 |
9606 | - |
6:41683978-41691476  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008F3 | CIL_0008F3_0001 | VISTA | 6:41112821-41713777 |
| CIL_0007QG | CIL_0007QG_0001 | VISTA | 6:41166717-41767957 |
| CIL_0008IB | CIL_0008IB_0001 | VISTA | 6:41169077-41770286 |
| CIL_0008XI | CIL_0008XI_0001 | VISTA | 6:41187113-41790491 |
| CIL_00093V | CIL_00093V_0001 | VISTA | 6:41255486-41855939 |
| CIL_000963 | CIL_000963_0001 | VISTA | 6:41292979-41894337 |
| CIL_00028Y | CIL_00028Y_0002 | CGP | 6:41636882-41736259 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0001892 | ISS | embryonic placenta development |
| GO:0003700 | IDA | sequence-specific DNA binding transcription factor activity |
| GO:0005634 | IDA | nucleus |
| GO:0005737 | IDA | cytoplasm |
| GO:0006351 | IEA | transcription, DNA-templated |
| GO:0006355 | NAS:IEA | regulation of transcription, DNA-templated |
| GO:0006914 | IEA | autophagy |
| GO:0006959 | IEA:ISS | humoral immune response |
| GO:0007040 | IMP | lysosome organization |
| GO:0010508 | IMP | positive regulation of autophagy |
| GO:0044212 | IDA | transcription regulatory region DNA binding |
| GO:0045893 | IEA | positive regulation of transcription, DNA-templated |
| GO:0045944 | IDA | positive regulation of transcription from RNA polymerase II promoter |
| GO:0046983 | IEA | protein dimerization activity |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000024786
|
Tfeb-001 | protein_coding | Mus_musculus | 0 | 1908 |
|
ENSMUST00000113288
|
Tfeb-003 | protein_coding | Mus_musculus | 0 | 1906 |
|
ENSMUST00000086932
|
Tfeb-002 | protein_coding | Mus_musculus | 0 | 1905 |
|
ENSMUST00000146782
|
Tfeb-009 | protein_coding | Mus_musculus | 0 | 1336 |
|
ENSMUST00000113284
|
Tfeb-011 | protein_coding | Mus_musculus | 0 | 1037 |
|
ENSMUST00000140715
|
Tfeb-007 | retained_intron | Mus_musculus | 0 | 523 |
|
ENSMUST00000124765
|
Tfeb-008 | processed_transcript | Mus_musculus | 0 | 470 |
|
ENSMUST00000141631
|
Tfeb-006 | protein_coding | Mus_musculus | 0 | 424 |
|
ENSMUST00000159641
|
Tfeb-013 | protein_coding | Mus_musculus | 0 | 324 |
|
ENSMUST00000160373
|
Tfeb-014 | protein_coding | Mus_musculus | 0 | 322 |
|
ENSMUST00000130208
|
Tfeb-005 | protein_coding | Mus_musculus | 0 | 320 |
|
ENSMUST00000162719
|
Tfeb-015 | retained_intron | Mus_musculus | 0 | 303 |
|
ENSMUST00000125177
|
Tfeb-004 | protein_coding | Mus_musculus | 0 | 291 |
|
ENSMUST00000137845
|
Tfeb-012 | protein_coding | Mus_musculus | 7e-38 | 163 |
|
ENSMUST00000126258
|
Tfeb-010 | protein_coding | Mus_musculus | 9e-37 | 159 |
