C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho GTPase activating protein 44
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000130420 Arhgap44-003 ENSMUSG00000033389 10090 - 11:65002041-65059834 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastHeartKidneyLungMuscleOvaryENSMUST00000130420
Transcript ID Adrenal Breast Heart Kidney Lung Muscle Ovary
ENSMUST00000130420 1.908±0.00 0.881±0.00 1.476±0.00 1.193±0.06 5.797±0.00 1.633±0.00 2.649±0.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008DU CIL_0008DU_0002 VISTA 11:64598596-65200939
CIL_0008QC CIL_0008QC_0002 VISTA 11:64908855-65510457

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000098100 arhgap44-201 protein_coding Danio_rerio 0 689
ENSDART00000152862 arhgap44-001 protein_coding Danio_rerio 0 658
ENST00000262444 ARHGAP44-009 protein_coding Homo_sapiens 0 2503
ENST00000340825 ARHGAP44-001 protein_coding Homo_sapiens 0 2100
ENST00000379672 ARHGAP44-011 protein_coding Homo_sapiens 0 2217
ENST00000538915 ARHGAP44-007 retained_intron Homo_sapiens 0 658
ENST00000544416 ARHGAP44-010 nonsense_mediated_decay Homo_sapiens 0 1515
ENST00000578087 ARHGAP44-005 processed_transcript Homo_sapiens 0 276
ENST00000578442 ARHGAP44-003 retained_intron Homo_sapiens 0 267
ENST00000580768 ARHGAP44-002 nonsense_mediated_decay Homo_sapiens 0 2124
ENST00000581437 ARHGAP44-006 protein_coding Homo_sapiens 0 477
ENST00000583608 ARHGAP44-012 protein_coding Homo_sapiens 0 710
ENST00000616670 ARHGAP44-201 protein_coding Homo_sapiens 0 955

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