C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000131327 Tcirg1-005 ENSMUSG00000001750 10090 - 19:3896050-3903072 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000131327
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000131327 14.005±1.67 10.825±0.69 8.972±2.50 3.087±0.00 17.106±3.59 12.999±2.87 1.362±0.00 4.249±0.07 7.839±2.62 14.147±2.10 0.826±0.23 13.235±4.39 5.192±0.72 0.862±0.33

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265686 TCIRG1-001 protein_coding Homo_sapiens 0 867
ENST00000524598 TCIRG1-011 protein_coding Homo_sapiens 0 392
ENST00000525724 TCIRG1-009 retained_intron Homo_sapiens 0 867
ENST00000527530 TCIRG1-013 retained_intron Homo_sapiens 0 339
ENST00000529364 TCIRG1-014 protein_coding Homo_sapiens 0 436
ENST00000530449 TCIRG1-006 retained_intron Homo_sapiens 0 196
ENST00000532635 TCIRG1-016 protein_coding Homo_sapiens 0 867
ENST00000533005 TCIRG1-004 retained_intron Homo_sapiens 0 1277
ENST00000534673 TCIRG1-010 nonsense_mediated_decay Homo_sapiens 0 291

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