C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000131358 Taf4a-001 ENSMUSG00000039117 10090 - 2:179912152-179975559 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000131358
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000131358 2.836±1.54 6.212±0.66 4.366±0.36 5.424±3.12 4.360±2.14 7.937±1.11 2.053±0.69 3.212±0.50 2.943±1.72 5.338±0.33 2.485±0.70 4.876±1.38 5.207±2.91 2.436±0.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000693 CIL_000693_0003 CGP 2:179442431-179976646
CIL_0001DN CIL_0001DN_0002 CGP 2:179912146-180035465

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000252996 TAF4-001 protein_coding Homo_sapiens 0 2649
ENST00000436129 TAF4-009 retained_intron Homo_sapiens 0 1899
ENST00000474089 TAF4-006 protein_coding Homo_sapiens 0 198
ENST00000488539 TAF4-004 protein_coding Homo_sapiens 0 532
ENST00000608458 TAF4-007 retained_intron Homo_sapiens 0 477
ENST00000608887 TAF4-010 processed_transcript Homo_sapiens 0 298

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