C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SURP and G patch domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000131489 Sugp2-002 ENSMUSG00000036054 10090 + 8:70234226-70263105 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaENSMUST00000131489
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000131489 10.510±1.11 10.749±1.56 12.953±2.69 24.111±5.74 9.186±1.23 6.559±0.52 2.867±0.17 3.720±0.47 4.550±2.09 7.803±0.84 12.028±3.03 5.004±1.93

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006BC CIL_0006BC_0002 CGP 8:70184340-70234466

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0006397 IEA mRNA processing
GO:0008150 ND biological_process
GO:0008380 IEA RNA splicing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000330854 SUGP2-007 nonsense_mediated_decay Homo_sapiens 0 1170
ENST00000337018 SUGP2-003 protein_coding Homo_sapiens 0 1221
ENST00000452918 SUGP2-009 protein_coding Homo_sapiens 0 1170
ENST00000593795 SUGP2-013 nonsense_mediated_decay Homo_sapiens 0 263
ENST00000594773 SUGP2-002 nonsense_mediated_decay Homo_sapiens 0 1164
ENST00000597280 SUGP2-012 nonsense_mediated_decay Homo_sapiens 0 350
ENST00000598202 SUGP2-011 processed_transcript Homo_sapiens 0 383
ENST00000598240 SUGP2-005 nonsense_mediated_decay Homo_sapiens 0 671
ENST00000600239 SUGP2-008 nonsense_mediated_decay Homo_sapiens 0 1170
ENST00000600377 SUGP2-004 protein_coding Homo_sapiens 0 1164
ENST00000601879 SUGP2-001 protein_coding Homo_sapiens 0 1164

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