C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: GPN-loop GTPase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000131628 Gpn1-002 ENSMUSG00000064037 10090 + 5:31494752-31503024 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENSMUST00000131628
Transcript ID Ovary
ENSMUST00000131628 0.613±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00013L CIL_00013L_0002 CGP 5:31485859-31512903
CIL_00013M CIL_00013M_0002 CGP 5:31494741-31527807

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000187762 TMEM38A-001 protein_coding Homo_sapiens 0.00000008 64
ENST00000264718 GPN1-001 protein_coding Homo_sapiens 0 263
ENST00000407583 GPN1-003 protein_coding Homo_sapiens 0 263
ENST00000424214 GPN1-201 protein_coding Homo_sapiens 0 263
ENST00000436280 GPN1-006 nonsense_mediated_decay Homo_sapiens 0 261
ENST00000458167 GPN1-202 protein_coding Homo_sapiens 0 261
ENST00000461249 GPN1-004 processed_transcript Homo_sapiens 0 261
ENST00000478484 GPN1-007 retained_intron Homo_sapiens 2e-23 113
ENST00000503738 GPN1-008 protein_coding Homo_sapiens 0 261
ENST00000515877 GPN1-009 protein_coding Homo_sapiens 0 263
ENST00000610189 GPN1-010 protein_coding Homo_sapiens 0 263
ENST00000616939 GPN1-203 protein_coding Homo_sapiens 0 263

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