C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PR domain containing 15
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000131951 Prdm15-004 ENSMUSG00000014039 10090 - 16:97792332-97800302 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaENSMUST00000131951
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000131951 1.007±0.35 1.672±0.62 1.144±0.00 1.758±0.18 1.636±0.24 0.387±0.00 0.697±0.06 0.653±0.23 0.873±0.04 2.478±0.60 0.492±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001VK CIL_0001VK_0002 CGP 16:97741933-97851850
CIL_0001D3 CIL_0001D3_0003 CGP 16:97791467-97922633

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000269844 PRDM15-201 protein_coding Homo_sapiens 0 1016
ENST00000398548 PRDM15-018 protein_coding Homo_sapiens 0 1016
ENST00000422911 PRDM15-010 protein_coding Homo_sapiens 0 1016
ENST00000433067 PRDM15-001 nonsense_mediated_decay Homo_sapiens 0 1016
ENST00000441787 PRDM15-015 nonsense_mediated_decay Homo_sapiens 0 1016
ENST00000447016 PRDM15-002 nonsense_mediated_decay Homo_sapiens 0 1016
ENST00000447207 PRDM15-202 protein_coding Homo_sapiens 0 1016
ENST00000449395 PRDM15-016 nonsense_mediated_decay Homo_sapiens 0 1016
ENST00000465955 PRDM15-014 processed_transcript Homo_sapiens 0 292
ENST00000470586 PRDM15-004 processed_transcript Homo_sapiens 0 891
ENST00000486812 PRDM15-003 retained_intron Homo_sapiens 0 891
ENST00000495217 PRDM15-012 processed_transcript Homo_sapiens 0 420

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