C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DEAD (Asp-Glu-Ala-Asp) box polypeptide 20
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000132008 Ddx20-002 ENSMUSG00000027905 10090 - 3:105681489-105687444 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryENSMUST00000132008
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary
ENSMUST00000132008 2.080±1.69 30.479±12.83 1.178±0.08 9.447±8.24 5.153±3.28 0.406±0.04 1.419±1.58 1.776±0.85 6.490±7.15 30.429±20.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00075Y CIL_00075Y_0002 CGP 3:105452330-105687574

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000369702 DDX20-001 protein_coding Homo_sapiens 0 1057
ENST00000475700 DDX20-002 protein_coding Homo_sapiens 0 344
ENST00000524894 DDX20-004 retained_intron Homo_sapiens 3e-18 95
ENST00000533164 DDX20-003 nonsense_mediated_decay Homo_sapiens 0 483

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