C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000296499 NDST3-001 ENSG00000164100 9606 + 4:118034345-118258648 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000296499
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000296499 0.008±0.00 0.084±0.00 1.433±0.92 0.006±0.00 0.018±0.01 0.010±0.00 0.336±0.29 0.056±0.00 0.004±0.00 0.001±0.00 0.053±0.04 0.014±0.01 0.027±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005794 IEA Golgi apparatus
GO:0008146 IEA sulfotransferase activity
GO:0015012 IEA heparan sulfate proteoglycan biosynthetic process
GO:0015016 IEA [heparan sulfate]-glucosamine N-sulfotransferase activity
GO:0016021 IEA integral component of membrane
GO:0016787 IEA hydrolase activity
GO:0019213 IEA deacetylase activity
GO:0030210 IEA heparin biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000154668 Ndst3-001 protein_coding Mus_musculus 0 3321
ENSMUST00000029602 Ndst3-201 protein_coding Mus_musculus 0 3277
ENSMUST00000137404 Ndst3-002 nonsense_mediated_decay Mus_musculus 0 2388
ENSMUST00000132112 Ndst3-004 protein_coding Mus_musculus 0 1829
ENSMUST00000124803 Ndst3-005 protein_coding Mus_musculus 0 1829
ENSMUST00000172537 Ndst3-003 protein_coding Mus_musculus 0 1088
ENSMUST00000132896 Ndst3-006 processed_transcript Mus_musculus 0 265

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