C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BRCA1 associated protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000132491 Brap-003 ENSMUSG00000029458 10090 + 5:121660601-121663973 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TJ CIL_0008TJ_0002 VISTA 5:121625608-122227679

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000222120 RAB3D-001 protein_coding Homo_sapiens 0.00008 55
ENST00000310862 SLC25A30-003 nonsense_mediated_decay Homo_sapiens 0.00007 53
ENST00000369367 SCAF11-001 protein_coding Homo_sapiens 0.0001 55
ENST00000433720 CHN2-005 protein_coding Homo_sapiens 0.00003 53
ENST00000453909 ZNF674-003 retained_intron Homo_sapiens 0.0001 53
ENST00000492679 KCP-007 retained_intron Homo_sapiens 0.0001 53
ENST00000508867 POLK-005 retained_intron Homo_sapiens 0.00001 57
ENST00000512701 TTC39B-001 protein_coding Homo_sapiens 0.00001 58
ENST00000598041 DPP9-022 protein_coding Homo_sapiens 0.00003 53

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