C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tetratricopeptide repeat domain 39B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000512701 TTC39B-001 ENSG00000155158 9606 - 9:15163622-15307360 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000512701
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000512701 0.953±0.00 0.988±0.00 2.494±0.00 0.548±0.00 1.125±0.00 0.284±0.00 2.592±0.00 0.485±0.00 1.950±0.09 1.324±0.00 1.871±1.09 0.277±0.21 0.822±0.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00014A CIL_00014A_0001 CGP 9:14734666-15307360
CIL_000147 CIL_000147_0001 CGP 9:15163622-15465953

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102823 Ttc39b-001 protein_coding Mus_musculus 0 1953
ENSMUST00000048274 Ttc39b-002 protein_coding Mus_musculus 0 1445
ENSMUST00000146519 Ttc39b-005 processed_transcript Mus_musculus 0 726
ENSMUST00000150522 Ttc39b-007 protein_coding Mus_musculus 0 625
ENSMUST00000030205 Ttc39b-003 protein_coding Mus_musculus 0 508
ENSMUST00000148811 Ttc39b-006 protein_coding Mus_musculus 0 409
ENSMUST00000132491 Brap-003 retained_intron Mus_musculus 0.00001 58
ENSMUST00000105140 AW011738-201 protein_coding Mus_musculus 0.0007 53

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