C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: formin homology 2 domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000132777 Fhod1-002 ENSMUSG00000014778 10090 - 8:105329163-105347909 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaENSMUST00000132777
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta
ENSMUST00000132777 3.015±0.44 1.689±0.00 2.747±0.21 1.153±0.04 2.835±0.35 4.024±0.54 1.342±0.19 2.308±0.16 8.774±1.05 2.066±0.23 2.251±0.52 5.909±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005K1 CIL_0005K1_0002 CGP 8:105312341-105335219
CIL_0005K2 CIL_0005K2_0002 CGP 8:105326354-105347953
CIL_0003M0 CIL_0003M0_0003 CGP 8:105329163-105369881

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000093281 FHOD3 (2 of 2)-201 protein_coding Danio_rerio 1e-17 97
ENSDART00000146050 FHOD3 (2 of 2)-001 protein_coding Danio_rerio 1e-17 97
ENST00000258201 FHOD1-001 protein_coding Homo_sapiens 0 1570
ENST00000561922 FHOD1-003 nonsense_mediated_decay Homo_sapiens 0 941
ENST00000562266 FHOD1-009 retained_intron Homo_sapiens 5e-33 145
ENST00000566006 FHOD1-008 retained_intron Homo_sapiens 0 246
ENST00000566345 SLC9A5-008 protein_coding Homo_sapiens 2e-34 150
ENST00000567509 FHOD1-007 nonsense_mediated_decay Homo_sapiens 0 368
ENST00000567561 FHOD1-006 nonsense_mediated_decay Homo_sapiens 0 399
ENST00000567752 FHOD1-002 retained_intron Homo_sapiens 0 1018
ENST00000568595 FHOD1-005 nonsense_mediated_decay Homo_sapiens 0 387
ENST00000569085 FHOD1-010 retained_intron Homo_sapiens 8e-23 111

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