C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000132947 Pds5b-003 ENSMUSG00000034021 10090 + 5:150805229-150810480 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryENSMUST00000132947
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary
ENSMUST00000132947 3.072±1.97 2.505±0.53 3.398±0.00 6.270±0.01 2.717±0.81 1.166±0.33 1.177±0.15 1.678±0.38 1.065±0.56 4.923±1.65 2.112±0.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006FL CIL_0006FL_0002 CGP 5:150608007-150810690
CIL_0000UY CIL_0000UY_0002 CGP 5:150673739-150993809

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000315596 PDS5B-006 protein_coding Homo_sapiens 0 1182
ENST00000450460 PDS5B-007 nonsense_mediated_decay Homo_sapiens 0 617

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