C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000UY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000083642-ENSG00000133116 CGP 9606 13:32586427-33066145
GeneTranscriptPositionBiotype
ENSG00000083642 (PDS5B)
PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae) 		ENST00000315596 (PDS5B-006) 32586427-32778019 protein_coding
ENST00000447833 (PDS5B-012) 32758169-32770546 protein_coding
ENST00000450460 (PDS5B-007) 32586548-32775908 nonsense_mediated_decay
ENST00000466078 (PDS5B-002) 32586569-32650617 retained_intron
ENST00000474274 (PDS5B-010) 32770190-32771079 retained_intron
ENST00000481616 (PDS5B-004) 32700984-32710068 retained_intron
ENST00000482955 (PDS5B-011) 32586455-32658349 retained_intron
ENST00000493653 (PDS5B-008) 32586551-32652605 retained_intron
ENST00000498550 (PDS5B-009) 32586543-32691268 retained_intron
ENSG00000133116 (KL)
klotho 		ENST00000380099 (KL-001) 33016433-33066145 protein_coding
ENST00000487852 (KL-002) 33016433-33064303 processed_transcript
ENSG00000207325 (RNY1P4)
RNA, Ro-associated Y1 pseudogene 4 		ENST00000384595 (RNY1P4-201) 32763438-32763552 misc_RNA
ENSG00000226968 (LINC00423)
long intergenic non-protein coding RNA 423 		ENST00000421002 (LINC00423-001) 32877431-32911650 lincRNA
ENSG00000277151 (RP11-380B4.3)
 ENST00000617901 (RP11-380B4.3-001) 32782874-32788178 lincRNA
CIL_0000UY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034021-ENSMUSG00000058488 CGP 10090 5:150673739-150993809
GeneTranscriptPositionBiotype
ENSMUSG00000034021 (Pds5b)
PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae) 		ENSMUST00000016569 (Pds5b-001) 150673739-150810690 protein_coding
ENSMUST00000038900 (Pds5b-201) 150673827-150810667 protein_coding
ENSMUST00000110486 (Pds5b-002) 150756303-150797424 protein_coding
ENSMUST00000132947 (Pds5b-003) 150805229-150810480 retained_intron
ENSMUST00000133738 (Pds5b-004) 150747822-150748613 processed_transcript
ENSMUST00000154083 (Pds5b-005) 150759364-150769865 processed_transcript
ENSMUSG00000058488 (Kl)
klotho 		ENSMUST00000078856 (Kl-201) 150952607-150993809 protein_coding
ENSMUSG00000077592 (Gm26013)
predicted gene, 26013 		ENSMUST00000104404 (Gm26013-201) 150710846-150710964 snoRNA
ENSMUSG00000084717 (Gm24630)
predicted gene, 24630 		ENSMUST00000122768 (Gm24630-201) 150708044-150708149 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000UY_0001ENSG00000083642ENST00000315596ENST00000447833ENST00000450460ENST00000466078ENST00000474274ENST00000481616ENST00000482955ENST00000493653ENST00000498550ENSG00000133116ENST00000380099ENST00000487852ENSG00000207325ENST00000384595ENSG00000226968ENST00000421002ENSG00000277151ENST00000617901CIL_0000UY_0002ENSMUSG00000034021ENSMUST00000016569ENSMUST00000038900ENSMUST00000110486ENSMUST00000132947ENSMUST00000133738ENSMUST00000154083ENSMUSG00000058488ENSMUST00000078856ENSMUSG00000077592ENSMUST00000104404ENSMUSG00000084717ENSMUST00000122768
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000UY_0001ENSG00000083642ENST00000315596ENST00000447833ENST00000450460ENST00000474274ENST00000498550ENSG00000133116ENST00000380099ENST00000487852ENSG00000207325ENST00000384595ENSG00000226968ENST00000421002ENSG00000277151ENST00000617901CIL_0000UY_0002ENSMUSG00000034021ENSMUST00000016569ENSMUST00000038900ENSMUST00000110486ENSMUST00000132947ENSMUST00000154083ENSMUSG00000058488ENSMUST00000078856ENSMUSG00000077592ENSMUST00000104404ENSMUSG00000084717ENSMUST00000122768
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000083642 ENST00000315596 2.971±0.00 N/A N/A 5.625±0.61 1.266±0.00 1.951±0.41 1.013±0.43 1.197±0.00 2.015±1.32 1.945±0.81 2.724±0.00 3.009±1.03 1.340±0.34 4.455±1.73
ENST00000447833 N/A N/A N/A N/A N/A 7.568±0.00 N/A 2.377±0.00 2.373±0.00 6.276±0.00 N/A 13.060±0.00 6.523±0.00 11.099±0.00
ENST00000450460 3.073±0.00 2.549±0.00 0.742±0.00 2.906±0.00 1.495±0.00 2.464±0.00 0.952±0.00 1.426±0.41 1.043±0.80 2.287±0.00 N/A 1.835±0.29 1.017±0.36 2.015±0.25
ENST00000466078 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474274 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.880±0.00 4.294±0.00 N/A
ENST00000481616 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482955 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493653 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498550 N/A N/A 1.714±0.00 N/A 3.795±0.00 N/A 0.780±0.00 1.107±0.00 3.710±0.00 6.908±0.00 0.387±0.00 5.796±0.00 N/A N/A
ENSG00000133116 ENST00000380099 1.154±0.00 N/A 12.072±0.00 0.545±0.07 1.203±0.00 0.828±0.32 0.194±0.06 9.787±9.76 0.055±0.00 3.615±0.26 0.344±0.00 0.149±0.04 8.400±1.47 0.637±0.33
ENST00000487852 N/A N/A N/A N/A 0.408±0.00 N/A 0.159±0.03 N/A N/A N/A 0.232±0.00 N/A N/A 0.192±0.00
ENSG00000207325 ENST00000384595 0.452±0.00 N/A N/A 0.596±0.00 N/A 0.802±0.00 N/A N/A N/A N/A N/A N/A N/A 0.590±0.00
ENSG00000226968 ENST00000421002 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.016±0.00 N/A 0.059±0.00
ENSG00000277151 ENST00000617901 0.100±0.00 0.114±0.00 0.195±0.00 0.291±0.20 0.252±0.14 0.163±0.09 0.069±0.05 0.158±0.08 0.080±0.08 0.335±0.25 0.067±0.03 0.260±0.23 0.036±0.01 0.073±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000034021 ENSMUST00000016569 1.091±0.10 N/A 2.940±0.86 7.974±3.18 0.949±0.05 0.227±0.00 0.903±0.58 0.822±0.35 2.419±1.40 1.183±0.45 3.221±0.62 2.407±1.41 2.258±1.40 1.199±0.46
ENSMUST00000038900 1.539±0.63 0.798±0.25 N/A 2.091±0.23 1.487±0.67 0.973±0.42 1.148±0.33 1.016±0.35 0.625±0.28 1.019±0.32 0.596±0.08 1.606±0.72 0.991±0.00 0.795±0.14
ENSMUST00000110486 0.760±0.00 0.962±0.00 N/A N/A 0.908±0.00 N/A N/A N/A N/A N/A N/A 1.466±0.00 0.861±0.00 1.294±0.34
ENSMUST00000132947 3.072±1.97 2.505±0.53 3.398±0.00 6.270±0.01 2.717±0.81 1.166±0.33 1.177±0.15 1.678±0.38 1.065±0.56 4.923±1.65 N/A 2.112±0.81 N/A N/A
ENSMUST00000133738 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154083 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.176±1.45 N/A N/A
ENSMUSG00000058488 ENSMUST00000078856 0.012±0.00 0.104±0.04 0.440±0.00 0.538±0.54 0.062±0.04 0.087±0.04 0.023±0.01 78.798±13.33 0.068±0.09 0.185±0.07 0.088±0.03 1.638±0.78 0.046±0.05 0.188±0.12
ENSMUSG00000077592 ENSMUST00000104404 N/A N/A N/A 8.459±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000084717 ENSMUST00000122768 N/A N/A 117.004±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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