C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) 26S subunit, non-ATPase, 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000133386 Psmd9-002 ENSMUSG00000029440 10090 + 5:123228190-123245268 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonLiverLungOvaryTestisENSMUST00000133386
Transcript ID Adipose Adrenal Brain Breast Colon Liver Lung Ovary Testis
ENSMUST00000133386 1.239±0.00 1.374±0.49 1.478±0.00 1.123±0.35 1.704±0.49 1.309±0.00 1.039±0.06 2.022±0.36 1.289±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002ZH CIL_0002ZH_0002 CGP 5:123171807-123250131
CIL_0002ZG CIL_0002ZG_0002 CGP 5:123228190-123327484

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261817 PSMD9-001 protein_coding Homo_sapiens 0 523
ENST00000535293 PSMD9-009 nonsense_mediated_decay Homo_sapiens 0 315
ENST00000537407 PSMD9-002 nonsense_mediated_decay Homo_sapiens 0 523
ENST00000538613 PSMD9-005 protein_coding Homo_sapiens 0 403
ENST00000541212 PSMD9-003 protein_coding Homo_sapiens 0 525
ENST00000543699 PSMD9-004 nonsense_mediated_decay Homo_sapiens 0 403
ENST00000544724 PSMD9-008 retained_intron Homo_sapiens 0 320

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