C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lysophosphatidylcholine acyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000133791 Lpcat1-004 ENSMUSG00000021608 10090 + 13:73467423-73501458 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastHeartKidneyLiverTestisENSMUST00000133791
Transcript ID Adipose Breast Heart Kidney Liver Testis
ENSMUST00000133791 3.586±0.12 8.101±0.00 2.994±0.29 4.000±0.40 0.674±0.11 0.621±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008Q6 CIL_0008Q6_0002 VISTA 13:72998274-73600313
CIL_0003AA CIL_0003AA_0002 CGP 13:73331009-73516422

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000283415 LPCAT1-002 protein_coding Homo_sapiens 0 785
ENST00000475622 LPCAT1-001 nonsense_mediated_decay Homo_sapiens 0 785
ENST00000507282 LPCAT1-006 retained_intron Homo_sapiens 0 451
ENST00000513757 LPCAT1-008 retained_intron Homo_sapiens 0 411
ENST00000514484 LPCAT1-004 processed_transcript Homo_sapiens 0 599
ENST00000611696 AYTL2-201 protein_coding Homo_sapiens 0 660

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