C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003AA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000070607-ENSDARG00000011506 CGP 7955 19:28769785-28819829
GeneTranscriptPositionBiotype
ENSDARG00000011506 (lpcat1)
lysophosphatidylcholine acyltransferase 1 		ENSDART00000103855 (lpcat1-003) 28777105-28819820 protein_coding
ENSDART00000139433 (lpcat1-005) 28777041-28805804 protein_coding
ENSDART00000140038 (lpcat1-002) 28807344-28816762 processed_transcript
ENSDART00000150932 (lpcat1-001) 28816892-28819829 nonsense_mediated_decay
ENSDART00000151752 (lpcat1-004) 28777041-28801618 nonsense_mediated_decay
ENSDARG00000070607 (mrpl36)
mitochondrial ribosomal protein L36 		ENSDART00000103862 (mrpl36-001) 28769785-28775878 protein_coding
CIL_0003AA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021607-ENSMUSG00000021608 CGP 10090 13:73331009-73516422
GeneTranscriptPositionBiotype
ENSMUSG00000021607 (Mrpl36)
mitochondrial ribosomal protein L36 		ENSMUST00000022098 (Mrpl36-201) 73331009-73332175 protein_coding
ENSMUSG00000021608 (Lpcat1)
lysophosphatidylcholine acyltransferase 1 		ENSMUST00000022099 (Lpcat1-001) 73467197-73516422 protein_coding
ENSMUST00000123766 (Lpcat1-003) 73467197-73516422 nonsense_mediated_decay
ENSMUST00000124627 (Lpcat1-006) 73510949-73511606 retained_intron
ENSMUST00000133791 (Lpcat1-004) 73467423-73501458 retained_intron
ENSMUST00000140431 (Lpcat1-005) 73502861-73513841 retained_intron
ENSMUST00000147566 (Lpcat1-002) 73467231-73515112 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003AA_0001ENSDARG00000011506ENSDART00000103855ENSDART00000139433ENSDART00000140038ENSDART00000150932ENSDART00000151752ENSDARG00000070607ENSDART00000103862CIL_0003AA_0002ENSMUSG00000021607ENSMUST00000022098ENSMUSG00000021608ENSMUST00000022099ENSMUST00000123766ENSMUST00000124627ENSMUST00000133791ENSMUST00000140431ENSMUST00000147566
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003AA_0001ENSDARG00000011506ENSDART00000103855ENSDART00000139433ENSDART00000150932ENSDARG00000070607ENSDART00000103862CIL_0003AA_0002ENSMUSG00000021607ENSMUST00000022098ENSMUSG00000021608ENSMUST00000022099ENSMUST00000123766ENSMUST00000133791ENSMUST00000147566
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000011506 ENSDART00000103855 N/A N/A N/A 0.768±0.28 N/A N/A 1.126±0.00 11.136±3.82 0.123±0.00 N/A 0.344±0.00 N/A N/A N/A
ENSDART00000139433 N/A N/A N/A 1.950±0.61 N/A N/A 0.829±0.00 N/A 0.128±0.00 N/A N/A N/A N/A N/A
ENSDART00000140038 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000150932 N/A N/A N/A N/A N/A N/A N/A 33.544±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000151752 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000070607 ENSDART00000103862 N/A N/A N/A 6.781±7.32 N/A N/A 13.601±15.13 1.834±0.49 5.306±0.00 N/A 11.503±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021607 ENSMUST00000022098 44.237±5.64 142.217±16.32 37.747±3.62 20.839±10.89 71.981±29.58 100.397±7.31 29.759±5.07 46.777±6.57 44.869±7.52 46.652±6.97 23.938±1.72 64.479±26.00 24.748±10.18 12.159±5.36
ENSMUSG00000021608 ENSMUST00000022099 9.284±5.04 15.885±1.92 6.104±0.08 21.943±2.99 18.345±7.50 10.741±2.89 1.874±0.51 4.563±0.63 18.624±21.72 207.948±56.45 0.659±0.13 14.001±6.46 8.857±1.78 0.567±0.37
ENSMUST00000123766 N/A N/A N/A 6.673±0.00 N/A N/A N/A N/A N/A N/A 0.782±0.16 4.314±0.78 10.845±5.31 N/A
ENSMUST00000124627 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133791 3.586±0.12 N/A N/A N/A 8.101±0.00 N/A 2.994±0.29 4.000±0.40 0.674±0.11 N/A N/A N/A N/A 0.621±0.00
ENSMUST00000140431 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147566 2.113±0.10 N/A N/A 8.038±0.00 5.900±2.94 2.922±0.00 1.502±0.47 1.805±0.49 0.332±0.06 N/A 0.485±0.00 5.876±0.55 4.294±1.87 0.290±0.02

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