C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium channel, voltage-dependent, N type, alpha 1B subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000133892 Cacna1b-009 ENSMUSG00000004113 10090 - 2:24607991-24618321 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENSMUST00000133892
Transcript ID Ovary
ENSMUST00000133892 0.162±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000QH CIL_0000QH_0002 CGP 2:24603887-24919609

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005245 IMP voltage-gated calcium channel activity
GO:0005515 IPI protein binding
GO:0005891 IDA voltage-gated calcium channel complex
GO:0006816 IMP calcium ion transport
GO:0007269 IMP neurotransmitter secretion
GO:0007626 IMP locomotory behavior
GO:0008016 IMP regulation of heart contraction
GO:0008217 IMP regulation of blood pressure
GO:0008331 IBA high voltage-gated calcium channel activity
GO:0016020 IDA membrane
GO:0030425 IDA dendrite
GO:0043025 IDA neuronal cell body
GO:0048265 IMP response to pain
GO:0051924 IMP regulation of calcium ion transport
GO:0070509 IBA calcium ion import
GO:0070588 IMP calcium ion transmembrane transport
GO:0086010 IBA membrane depolarization during action potential

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000277549 CACNA1B-201 protein_coding Homo_sapiens 0 477
ENST00000277551 CACNA1B-002 protein_coding Homo_sapiens 0 477
ENST00000371355 CACNA1B-202 protein_coding Homo_sapiens 0 477
ENST00000371357 CACNA1B-005 protein_coding Homo_sapiens 0 477
ENST00000371363 CACNA1B-003 protein_coding Homo_sapiens 0 477
ENST00000371372 CACNA1B-001 protein_coding Homo_sapiens 0 477

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