C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ras homolog gene family, member T1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000134148 Rhot1-007 ENSMUSG00000017686 10090 + 11:80209147-80246403 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainPlacentaTestisENSMUST00000134148
Transcript ID Brain Placenta Testis
ENSMUST00000134148 4.681±0.00 2.584±0.39 3.378±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000VO CIL_0000VO_0002 CGP 11:80209019-80355955

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000333942 RHOT1-001 protein_coding Homo_sapiens 0 569
ENST00000354266 RHOT1-004 protein_coding Homo_sapiens 0 569
ENST00000358365 RHOT1-002 protein_coding Homo_sapiens 0 569
ENST00000394692 RHOT1-008 protein_coding Homo_sapiens 0 569
ENST00000436571 RHOT1P3-001 processed_pseudogene Homo_sapiens 0 396
ENST00000545287 RHOT1-015 protein_coding Homo_sapiens 0 569
ENST00000578205 RHOT1-007 nonsense_mediated_decay Homo_sapiens 0 569
ENST00000580976 RHOT1-010 processed_transcript Homo_sapiens 0 250
ENST00000581031 RHOT1-005 nonsense_mediated_decay Homo_sapiens 0 569
ENST00000581094 RHOT1-006 protein_coding Homo_sapiens 0 569
ENST00000583994 RHOT1-003 nonsense_mediated_decay Homo_sapiens 0 569

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