C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: wingless-type MMTV integration site family, member 5A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000134163 Wnt5a-003 ENSMUSG00000021994 10090 + 14:28511390-28523517 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonLiverOvaryPlacentaTestisENSMUST00000134163
Transcript ID Adipose Brain Breast Colon Liver Ovary Placenta Testis
ENSMUST00000134163 3.292±0.03 0.741±0.00 3.966±0.64 4.054±1.00 0.245±0.17 13.657±5.96 0.199±0.04 0.257±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00002X CIL_00002X_0002 CGP 14:27622442-28527447
CIL_00083K CIL_00083K_0002 VISTA 14:28201106-28802535
CIL_0007P0 CIL_0007P0_0002 UCNEbase 14:28252385-28776030
CIL_00002U CIL_00002U_0002 CGP 14:28504750-29721864

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264634 WNT5A-201 protein_coding Homo_sapiens 0 1554
ENST00000474267 WNT5A-001 protein_coding Homo_sapiens 0 1554
ENST00000482079 WNT5A-009 protein_coding Homo_sapiens 0 1343
ENST00000493406 WNT5A-007 processed_transcript Homo_sapiens 1e-35 156
ENST00000497027 WNT5A-005 protein_coding Homo_sapiens 0 1557
ENST00000497817 WNT5A-008 retained_intron Homo_sapiens 0 545
ENST00000614415 WNT5A-202 protein_coding Homo_sapiens 0 774

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